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	<title>Micrognome &#187; parasitology</title>
	<atom:link href="http://micrognome.priobe.net/tag/parasitology/feed/" rel="self" type="application/rss+xml" />
	<link>http://micrognome.priobe.net</link>
	<description>Microbes, infectious diseases and the causal relationship that links them</description>
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		<item>
		<title>Malaria matters</title>
		<link>http://micrognome.priobe.net/2010/11/malaria-matters/</link>
		<comments>http://micrognome.priobe.net/2010/11/malaria-matters/#comments</comments>
		<pubDate>Sat, 13 Nov 2010 12:02:55 +0000</pubDate>
		<dc:creator>micrognome</dc:creator>
				<category><![CDATA[FACTM]]></category>
		<category><![CDATA[μGnotes]]></category>
		<category><![CDATA[ACTM]]></category>
		<category><![CDATA[clinical parasitology]]></category>
		<category><![CDATA[FACTM exam]]></category>
		<category><![CDATA[FACTM part I]]></category>
		<category><![CDATA[malaria]]></category>
		<category><![CDATA[parasitology]]></category>
		<category><![CDATA[Plasmodium]]></category>
		<category><![CDATA[travel medicine]]></category>
		<category><![CDATA[tropical medicine]]></category>

		<guid isPermaLink="false">http://micrognome.priobe.net/?p=1882</guid>
		<description><![CDATA[Lectures notes on tropical medicine, parasitology, travel &#038; entomology of malaria for FACTM part 1]]></description>
			<content:encoded><![CDATA[<iframe src="http://www.facebook.com/plugins/like.php?href=http%3A%2F%2Fmicrognome.priobe.net%2F2010%2F11%2Fmalaria-matters%2F&amp;layout=standard&amp;show_faces=true&amp;width=450&amp;action=like&amp;colorscheme=light&amp;height=80" scrolling="no" frameborder="0" style="border:none; overflow:hidden; width:450px; height:80px;" allowTransparency="true"></iframe><p>Now that the MicroGnome can reliably get lecture notes onto this Blog, here is the Malaria series for students of tropical medicine:</p>
<div id="__ss_5766844" style="width: 425px;"><strong><a title="FACTM Malaria 1" href="http://www.slideshare.net/thinglis/factm-malaria-1-5766844">Factm malaria 1</a></strong><object id="__sse5766844" classid="clsid:d27cdb6e-ae6d-11cf-96b8-444553540000" width="425" height="355" codebase="http://download.macromedia.com/pub/shockwave/cabs/flash/swflash.cab#version=6,0,40,0"><param name="allowFullScreen" value="true" /><param name="allowScriptAccess" value="always" /><param name="src" value="http://static.slidesharecdn.com/swf/ssplayer2.swf?doc=factmmalaria1-101113054917-phpapp02&amp;stripped_title=factm-malaria-1-5766844&amp;userName=thinglis" /><param name="name" value="__sse5766844" /><param name="allowfullscreen" value="true" /><embed id="__sse5766844" type="application/x-shockwave-flash" width="425" height="355" src="http://static.slidesharecdn.com/swf/ssplayer2.swf?doc=factmmalaria1-101113054917-phpapp02&amp;stripped_title=factm-malaria-1-5766844&amp;userName=thinglis" name="__sse5766844" allowscriptaccess="always" allowfullscreen="true"></embed></object></div>
<div id="__ss_5766847" style="width: 425px;"><strong><a title="FACTM Malaria 2" href="http://www.slideshare.net/thinglis/factm-malaria-2-5766847">Factm malaria 2</a></strong><object id="__sse5766847" classid="clsid:d27cdb6e-ae6d-11cf-96b8-444553540000" width="425" height="355" codebase="http://download.macromedia.com/pub/shockwave/cabs/flash/swflash.cab#version=6,0,40,0"><param name="allowFullScreen" value="true" /><param name="allowScriptAccess" value="always" /><param name="src" value="http://static.slidesharecdn.com/swf/ssplayer2.swf?doc=factmmalaria2-101113054929-phpapp01&amp;stripped_title=factm-malaria-2-5766847&amp;userName=thinglis" /><param name="name" value="__sse5766847" /><param name="allowfullscreen" value="true" /><embed id="__sse5766847" type="application/x-shockwave-flash" width="425" height="355" src="http://static.slidesharecdn.com/swf/ssplayer2.swf?doc=factmmalaria2-101113054929-phpapp01&amp;stripped_title=factm-malaria-2-5766847&amp;userName=thinglis" name="__sse5766847" allowscriptaccess="always" allowfullscreen="true"></embed></object></div>
<div id="__ss_5766843" style="width: 425px;"><strong><a title="FACTM Malaria 3" href="http://www.slideshare.net/thinglis/factm-malaria-3-5766843">Factm malaria 3</a></strong><object id="__sse5766843" classid="clsid:d27cdb6e-ae6d-11cf-96b8-444553540000" width="425" height="355" codebase="http://download.macromedia.com/pub/shockwave/cabs/flash/swflash.cab#version=6,0,40,0"><param name="allowFullScreen" value="true" /><param name="allowScriptAccess" value="always" /><param name="src" value="http://static.slidesharecdn.com/swf/ssplayer2.swf?doc=factmmalaria3-101113054918-phpapp01&amp;stripped_title=factm-malaria-3-5766843&amp;userName=thinglis" /><param name="name" value="__sse5766843" /><param name="allowfullscreen" value="true" /><embed id="__sse5766843" type="application/x-shockwave-flash" width="425" height="355" src="http://static.slidesharecdn.com/swf/ssplayer2.swf?doc=factmmalaria3-101113054918-phpapp01&amp;stripped_title=factm-malaria-3-5766843&amp;userName=thinglis" name="__sse5766843" allowscriptaccess="always" allowfullscreen="true"></embed></object></div>
<div id="__ss_5766850" style="width: 425px;"><strong><a title="FACTM Malaria 4" href="http://www.slideshare.net/thinglis/factm-malaria-4-5766850">Factm malaria 4</a></strong><object id="__sse5766850" classid="clsid:d27cdb6e-ae6d-11cf-96b8-444553540000" width="425" height="355" codebase="http://download.macromedia.com/pub/shockwave/cabs/flash/swflash.cab#version=6,0,40,0"><param name="allowFullScreen" value="true" /><param name="allowScriptAccess" value="always" /><param name="src" value="http://static.slidesharecdn.com/swf/ssplayer2.swf?doc=factmmalaria4-101113054932-phpapp02&amp;stripped_title=factm-malaria-4-5766850&amp;userName=thinglis" /><param name="name" value="__sse5766850" /><param name="allowfullscreen" value="true" /><embed id="__sse5766850" type="application/x-shockwave-flash" width="425" height="355" src="http://static.slidesharecdn.com/swf/ssplayer2.swf?doc=factmmalaria4-101113054932-phpapp02&amp;stripped_title=factm-malaria-4-5766850&amp;userName=thinglis" name="__sse5766850" allowscriptaccess="always" allowfullscreen="true"></embed></object></div>
]]></content:encoded>
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		<slash:comments>3</slash:comments>
		</item>
		<item>
		<title>Missing parasites?</title>
		<link>http://micrognome.priobe.net/2010/08/missing-parasites/</link>
		<comments>http://micrognome.priobe.net/2010/08/missing-parasites/#comments</comments>
		<pubDate>Tue, 03 Aug 2010 06:32:12 +0000</pubDate>
		<dc:creator>micrognome</dc:creator>
				<category><![CDATA[FACTM]]></category>
		<category><![CDATA[μGnostics]]></category>
		<category><![CDATA[μGnotes]]></category>
		<category><![CDATA[ACTM]]></category>
		<category><![CDATA[clinical tropical medicine]]></category>
		<category><![CDATA[entomology]]></category>
		<category><![CDATA[FACTM exam]]></category>
		<category><![CDATA[Leishmania]]></category>
		<category><![CDATA[Leishmaniasis]]></category>
		<category><![CDATA[parasitology]]></category>

		<guid isPermaLink="false">http://micrognome.priobe.net/?p=1496</guid>
		<description><![CDATA[Notes on clinical tropical medicine, parasitology and entomology of Leishmaniasis]]></description>
			<content:encoded><![CDATA[<iframe src="http://www.facebook.com/plugins/like.php?href=http%3A%2F%2Fmicrognome.priobe.net%2F2010%2F08%2Fmissing-parasites%2F&amp;layout=standard&amp;show_faces=true&amp;width=450&amp;action=like&amp;colorscheme=light&amp;height=80" scrolling="no" frameborder="0" style="border:none; overflow:hidden; width:450px; height:80px;" allowTransparency="true"></iframe><p><a href="http://micrognome.priobe.net/wp-content/uploads/2010/08/adult-sandfly.jpg"><img class="aligncenter size-medium wp-image-1510" title="adult sandfly" src="http://micrognome.priobe.net/wp-content/uploads/2010/08/adult-sandfly-300x230.jpg" alt="" width="300" height="230" /></a>So you missed this morning&#8217;s Tropical Medicine Breakfast and left the usual culprits to clear up the remains of breakfast. You missed a treat in more ways than one. With apologies to our out-of-town brethren who really do it tough, here are the electronic versions of the two Leishmaniasis units you missed.</p>
<ol>
<li><span style="font-size: medium;"><strong><a href="http://micrognome.priobe.net/wp-content/uploads/2010/08/FACTM-LEISH-1.pdf">Leishmaniasis 1</a>:</strong> clinical tropical medicine</span></li>
<li><span style="font-size: medium;"><strong><a href="http://micrognome.priobe.net/wp-content/uploads/2010/08/FACTM-LEISH-2.pdf">Leishmaniasis 2</a>:</strong> clinical parasitology &amp; entomology</span></li>
</ol>
<ul>
<li>
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</li>
<li>
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</li>
</ul>
<p><a href="http://micrognome.priobe.net/wp-content/uploads/2010/08/Leish-para-cycle-1.jpg"><img class="aligncenter size-medium wp-image-1509" title="Leish para cycle 1" src="http://micrognome.priobe.net/wp-content/uploads/2010/08/Leish-para-cycle-1-300x202.jpg" alt="" width="300" height="202" /></a></p>
<p>For those working towards the <a href="http://lifeinthefastlane.com/exams/actm-fellowship/">ACTM Fellowship exam </a>there are some useful on-line learning resources:</p>
<ul>
<li><a href="http://emedicine.medscape.com/article/783750-overview">eMedicine</a></li>
<li><a href="http://www.who.int/topics/leishmaniasis/en/">WHO</a></li>
<li><a href="http://www.cdc.gov/ncidod/dpd/parasites/leishmania/factsht_leishmania.htm">Centers for Disease Control &amp; Prevention</a></li>
<li><a href="http://www.mja.com.au/public/issues/186_06_190307/kon11048_fm.html">Medical Journal of Australia</a></li>
</ul>
]]></content:encoded>
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		<slash:comments>2</slash:comments>
		</item>
		<item>
		<title>Abdominal pain in an overseas resident</title>
		<link>http://micrognome.priobe.net/2010/06/abdominal-pain-in-an-overseas-resident/</link>
		<comments>http://micrognome.priobe.net/2010/06/abdominal-pain-in-an-overseas-resident/#comments</comments>
		<pubDate>Sun, 27 Jun 2010 12:54:20 +0000</pubDate>
		<dc:creator>micrognome</dc:creator>
				<category><![CDATA[FACTM]]></category>
		<category><![CDATA[μGnostics]]></category>
		<category><![CDATA[abdominal pain]]></category>
		<category><![CDATA[FACTM exam]]></category>
		<category><![CDATA[liver abscess]]></category>
		<category><![CDATA[overseas travel]]></category>
		<category><![CDATA[parasitology]]></category>

		<guid isPermaLink="false">http://micrognome.priobe.net/?p=1347</guid>
		<description><![CDATA[case of upper abdominal pain in overseas resident]]></description>
			<content:encoded><![CDATA[<iframe src="http://www.facebook.com/plugins/like.php?href=http%3A%2F%2Fmicrognome.priobe.net%2F2010%2F06%2Fabdominal-pain-in-an-overseas-resident%2F&amp;layout=standard&amp;show_faces=true&amp;width=450&amp;action=like&amp;colorscheme=light&amp;height=80" scrolling="no" frameborder="0" style="border:none; overflow:hidden; width:450px; height:80px;" allowTransparency="true"></iframe><p><span style="font-size: medium;"><strong><span style="font-size: large;">Clinical case of upper abdominal pain in overseas resident</span></strong></span></p>
<p><span style="font-size: medium;">A 54 year old businessman presents with right upper quadrant pain after spending the last six months living in Java.</span></p>
<p><span style="font-size: medium;">An ultrasound scan revealed gallstones. A laparoscopic cholecystectomy was then performed. At this point a lesion was observed on the surface of the liver, but not biopsied.</span></p>
<p><span style="font-size: medium;">Four months later, on another return visit to Australia, the patient re-presented with fever, a cough and pain radiating to his shoulder tip. He was admitted to a district hospital and a chest X-ray performed. Changes consistent with right lower lobe consolidation were observed and intravenous antibiotics (i.v. Ticarcillin/Clavulanic acid) commenced. The patient did not improve and was transferred to a larger hospital.</span></p>
<p>After 7 days of intravenous antibiotics he coughed up a large quantity of viscous, brown phlegm with a paste-like consistency. These CT scan views were obtained at this point:</p>
<div id="attachment_1351" class="wp-caption aligncenter" style="width: 293px"><a href="http://micrognome.priobe.net/wp-content/uploads/2010/06/CT-AALA.jpg"><img class="size-full wp-image-1351" title="CT AALA" src="http://micrognome.priobe.net/wp-content/uploads/2010/06/CT-AALA.jpg" alt="" width="283" height="212" /></a><p class="wp-caption-text">CT thorax after coughing up &#39;anchovy paste&#39;</p></div>
<p> </p>
<div id="attachment_1352" class="wp-caption aligncenter" style="width: 293px"><a href="http://micrognome.priobe.net/wp-content/uploads/2010/06/CT-AALA-2.jpg"><img class="size-full wp-image-1352" title="CT AALA 2" src="http://micrognome.priobe.net/wp-content/uploads/2010/06/CT-AALA-2.jpg" alt="" width="283" height="212" /></a><p class="wp-caption-text">CT upper abdomen showing hepatic lesion</p></div>
<p> </p>
<p>The patient&#8217;s serum was sent to the Microbiology laboratory with the following result:</p>
<p style="padding-left: 30px;"><em>Entamoeba histolytica</em> titre &gt; 1:4096</p>
<p>This was seen under the microscope in the paste-like sample of phlegm:</p>
<div id="attachment_1353" class="wp-caption aligncenter" style="width: 293px"><a href="http://micrognome.priobe.net/wp-content/uploads/2010/06/AALA-stool.jpg"><img class="size-full wp-image-1353" title="AALA sputum" src="http://micrognome.priobe.net/wp-content/uploads/2010/06/AALA-stool.jpg" alt="" width="283" height="211" /></a><p class="wp-caption-text">Microscope view of patient&#39;s sputum, showing microbe with internalised red cells</p></div>
<p> </p>
<p><strong>Q1   What do the CT scans show?</strong></p>
<p><a style="display:none;" id="ddetlink1615043319" href="javascript:expand(document.getElementById('ddet1615043319'))">Show answer</a>
<div class="ddet_div" id="ddet1615043319"><script language="JavaScript" type="text/javascript">expand(document.getElementById('ddet1615043319'));expand(document.getElementById('ddetlink1615043319'))</script></p>
<ul>
<li>CT thorax: peri-mediastinal opacity</li>
<li>CT upper abdomen: smooth-walled lesion within liver</li>
</ul>
<p></div></p>
<p><strong>Q2   What object was seen under the microscope?</strong></p>
<p><a style="display:none;" id="ddetlink104714618" href="javascript:expand(document.getElementById('ddet104714618'))">Show answer</a>
<div class="ddet_div" id="ddet104714618"><script language="JavaScript" type="text/javascript">expand(document.getElementById('ddet104714618'));expand(document.getElementById('ddetlink104714618'))</script></p>
<ul>
<li>amoebic trophozoite  (<em>Entamoeba histolytica</em>) containing erythrocytes</li>
</ul>
<p></div></p>
<p><strong>Q3   What pathological process explains these observations?</strong></p>
<p><a style="display:none;" id="ddetlink1642760017" href="javascript:expand(document.getElementById('ddet1642760017'))">Show answer</a>
<div class="ddet_div" id="ddet1642760017"><script language="JavaScript" type="text/javascript">expand(document.getElementById('ddet1642760017'));expand(document.getElementById('ddetlink1642760017'))</script></p>
<ul>
<li>amoebic liver abscess with trans-diaphragmatic extension and rupture into a bronchiole or bronchus, probably during coughing</li>
</ul>
<p></div></p>
<p><strong>Q4   What treatment would you recommend?</strong></p>
<p><a style="display:none;" id="ddetlink1389646414" href="javascript:expand(document.getElementById('ddet1389646414'))">Show answer</a>
<div class="ddet_div" id="ddet1389646414"><script language="JavaScript" type="text/javascript">expand(document.getElementById('ddet1389646414'));expand(document.getElementById('ddetlink1389646414'))</script></p>
<ul>
<li>750 mg Metronidazole i.v. x3 doses x 10 days</li>
<li>followed by paromomycin x3 doses</li>
</ul>
<p></div></p>
<ul>
<li><a href="http://micrognome.priobe.net/clinical-questions/"><span style="font-size: medium;"><strong>Additional clinical questions</strong></span></a></li>
<li><span style="font-size: medium;"><strong><a href="http://www.mja.com.au/public/issues/186_08_160407/van11346_fm.html">Amoebiasis in Australi</a></strong></span><span style="font-size: medium;"><strong><a href="http://www.mja.com.au/public/issues/186_08_160407/van11346_fm.html">a</a></strong></span></li>
<li><span style="font-size: small;"><strong><span style="font-size: medium;">Travel related infections, </span><a href="http://micrognome.priobe.net/2010/06/challenging-cases/"><span style="font-size: medium;">case series</span></a><span style="font-size: medium;"> from SCGH</span></strong></span></li>
</ul>
]]></content:encoded>
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		<slash:comments>1</slash:comments>
		</item>
		<item>
		<title>Barefoot answers</title>
		<link>http://micrognome.priobe.net/2010/04/barefoot-answers/</link>
		<comments>http://micrognome.priobe.net/2010/04/barefoot-answers/#comments</comments>
		<pubDate>Tue, 06 Apr 2010 23:57:24 +0000</pubDate>
		<dc:creator>micrognome</dc:creator>
				<category><![CDATA[FACTM]]></category>
		<category><![CDATA[μGnostics]]></category>
		<category><![CDATA[parasitology]]></category>
		<category><![CDATA[travel medicine]]></category>
		<category><![CDATA[tropical medicine]]></category>

		<guid isPermaLink="false">http://micrognome.priobe.net/?p=438</guid>
		<description><![CDATA[Cutaneous larva migrans (CLM).]]></description>
			<content:encoded><![CDATA[<iframe src="http://www.facebook.com/plugins/like.php?href=http%3A%2F%2Fmicrognome.priobe.net%2F2010%2F04%2Fbarefoot-answers%2F&amp;layout=standard&amp;show_faces=true&amp;width=450&amp;action=like&amp;colorscheme=light&amp;height=80" scrolling="no" frameborder="0" style="border:none; overflow:hidden; width:450px; height:80px;" allowTransparency="true"></iframe><p><strong><span style="font-size: small;">What is the infection?</span></strong></p>
<p>Cutaneous larva migrans (CLM).</p>
<p>This is caused by infection with animal hookworm larva (typically a dog or cat species,  eg <em>Ancylocystoma braziliense</em>).</p>
<p>Infection is acquired via direct inoculation when a human comes into skin contact with faeces containing the larva (often on a beach or a riverbank). The larva cannot complete its usual life cycle in a human, hence it wanders around the epidermis causing an intense pruritic reaction. CLM, sometimes known as creeping eruption or “ground itch”, is common in tropical regions including northern Australia. It most commonly affects the feet, but can occur on any part of the body.</p>
<p>Secondary bacterial infection is not uncommon</p>
<p><strong><span style="font-size: small;">What is the treatment?</span></strong></p>
<p>CLM will eventually resolve without treatment when the larva(e) dies, but this can take many weeks. Systemic therapy options include albendazole, ivermectin or thiabendazole.</p>
<p>Topical therapies include:</p>
<ul>
<li>Cryotherapy (eg ethyl chloride, liquid nitrogen) or other trauma to the leading edge of the lesion (to kill the migrating larva)</li>
<li>Thiabendazole cream applied to the lesions (not available on prescription in Australia; may be available via compounding pharmacies).</li>
</ul>
<p>MMWR Morb Mort Wkly Rep. <a href="http://www.cdc.gov/mmwr/preview/mmwrhtml/mm5649a2.htm?s_cid=mm5649a2_e">Outbreak of Cutaneous Larva Migrans at a Children&#8217;s Camp &#8212; Miami, Florida, 2006</a> (December 14, 2007 / 56(49);1285-1287.</p>
<p><strong>The Stafinator, 7th April.</strong></p>
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