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<channel>
	<title>Micrognome &#187; Burkholderia pseudomallei</title>
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	<link>http://micrognome.priobe.net</link>
	<description>Microbes, infectious diseases and the causal relationship that links them</description>
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		<title>Melioidosis aftermath</title>
		<link>http://micrognome.priobe.net/2011/06/melioidosis-aftermath/</link>
		<comments>http://micrognome.priobe.net/2011/06/melioidosis-aftermath/#comments</comments>
		<pubDate>Mon, 06 Jun 2011 06:19:26 +0000</pubDate>
		<dc:creator>micrognome</dc:creator>
				<category><![CDATA[Featured]]></category>
		<category><![CDATA[Review]]></category>
		<category><![CDATA[μGnomics]]></category>
		<category><![CDATA[Burkholderia pseudomallei]]></category>
		<category><![CDATA[climate change]]></category>
		<category><![CDATA[drinking water]]></category>
		<category><![CDATA[environmental control]]></category>
		<category><![CDATA[melioidosis]]></category>
		<category><![CDATA[melioidosis surveillance]]></category>
		<category><![CDATA[outbreak]]></category>
		<category><![CDATA[tropical cyclones]]></category>
		<category><![CDATA[Western Australia]]></category>

		<guid isPermaLink="false">http://micrognome.priobe.net/?p=2314</guid>
		<description><![CDATA[The events that followed the WA melioidosis outbreak of 1997 reviewed by the team that kept an eye on the issue ever since]]></description>
			<content:encoded><![CDATA[<iframe src="http://www.facebook.com/plugins/like.php?href=http%3A%2F%2Fmicrognome.priobe.net%2F2011%2F06%2Fmelioidosis-aftermath%2F&amp;layout=standard&amp;show_faces=true&amp;width=450&amp;action=like&amp;colorscheme=light&amp;height=80" scrolling="no" frameborder="0" style="border:none; overflow:hidden; width:450px; height:80px;" allowTransparency="true"></iframe><h2>The Aftermath of the Western Australian Melioidosis Outbreak.</h2>
<p><a title="The American journal of tropical medicine and hygiene."> </a></p>
<h4><a href="http://micrognome.priobe.net/wp-content/uploads/2011/06/wrinkly-Bp-tn.jpg"><img class="alignleft size-full wp-image-2323" title="wrinkly Bp tn" src="http://micrognome.priobe.net/wp-content/uploads/2011/06/wrinkly-Bp-tn.jpg" alt="" width="150" height="150" /></a>The <a href="http://www.ncbi.nlm.nih.gov/pubmed/10694154">1997 outbreak of septicaemic melioidosis</a> in a remote northwestern Australian community marked a watershed in public health microbiology response to bacterial infections in regional WA. This was the first time we attempted to put a scratch team together to provide immediate disease control measures, on-site environmental microbiology assessment and follow up with molecular epidemiology. This post looks at the aftermath of the melioidosis outbreak.</h4>
<p>Much has been learned in almost a decade and a half since the event; most notably the role of the <a href="http://www.ncbi.nlm.nih.gov/pubmed/10653571">drinking water supply</a> as a means of distribution of the causal agent, <em>Burkholderia pseudomallei</em>. Though we still don&#8217;t know exactly what the final means of exposure was, the disease control measures introduced in a hurry just before Christmas 1997 and the additional measures rolled out when we identified contamination of the water treatment installations a year later appear to have worked. There have been no further septicaemic cases attributable to exposure after the original outbreak in the last decade. It therefore looks like we may have stumbled upon an unexpected method of melioidosis control. Certainly not the only effective method, but at least it&#8217;s a start.</p>
<p>The other big insight has been the potential for occasional long distance movement of the causal agent, <em>B. pseudomallei </em>as a <a href="http://www.ncbi.nlm.nih.gov/pubmed/16326823">result of severe weather events</a>. We&#8217;ve known for some time that severe weather in northern Australia coincides with an increased occurence of melioidosis cases, but the incidental observation that peak years for the infection in WA are when tropical cyclones approach the state from a landward direction. At this point the association is based on 10 years&#8217; data generated as a result of disease notification in WA. It will be interesting to see how this shapes up over a longer period.</p>
<p>Disease notification has already alerted us to possible effects of climate change on the epidemiology of melioidosis. It should also allow monitoring of the results of agricultural and <a href="http://www.ncbi.nlm.nih.gov/pubmed?term=melioidosis%20industrial%20inglis">mining development </a>in the State&#8217;s north. Clearly we need to keep a close eye on the impact of industrial cultivation of rice in the Kimberley, since melioidosis is a disease of <a href="http://www.ncbi.nlm.nih.gov/pubmed/10476750">rice farmers in Southeast Asia</a>. Mine sites and other large scale industrial developments significantly alter soil conditions and bring workers into contact with the soil. This may also change the melioidosis risk in tropical WA.</p>
<p>Carefully organised and effectively targeted surveillance will help pin-point the risk and deliver disease workable control measures. Lessons learned in the aftermath of the 1997 melioidosis outbreak may bring wider benefits to the booming norther part of the State.</p>
<h4>About <a href="http://lifeinthefastlane.com/2010/05/melioidosis-a-disease-of-surprises/">melioidosis</a>.</h4>
<p><a href="http://micrognome.priobe.net/wp-content/uploads/2011/06/wrinkly-Bp-strip.jpg"><img class="aligncenter size-full wp-image-2324" title="wrinkly Bp strip" src="http://micrognome.priobe.net/wp-content/uploads/2011/06/wrinkly-Bp-strip.jpg" alt="" width="300" height="78" /></a></p>
<p>&nbsp;</p>
<p>&nbsp;</p>
<h4>References:</h4>
<blockquote>
<ul>
<li><a href="http://www.ncbi.nlm.nih.gov/pubmed/21633018">The Aftermath of the Western Australian Melioidosis Outbreak.</a></li>
</ul>
</blockquote>
<p>&nbsp;</p>
<p>&nbsp;</p>
<p>MicroGnome, 6-JUN-11.</p>
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		</item>
		<item>
		<title>Words of wisdom</title>
		<link>http://micrognome.priobe.net/2010/09/words-of-wisdom/</link>
		<comments>http://micrognome.priobe.net/2010/09/words-of-wisdom/#comments</comments>
		<pubDate>Sat, 25 Sep 2010 07:32:06 +0000</pubDate>
		<dc:creator>micrognome</dc:creator>
				<category><![CDATA[μGnomics]]></category>
		<category><![CDATA[μGnotes]]></category>
		<category><![CDATA[Burkholderia pseudomallei]]></category>
		<category><![CDATA[causes of infection]]></category>
		<category><![CDATA[diagnostic language]]></category>
		<category><![CDATA[melioidosis]]></category>
		<category><![CDATA[micrognosis]]></category>
		<category><![CDATA[principles of aetiology]]></category>

		<guid isPermaLink="false">http://micrognome.priobe.net/?p=1785</guid>
		<description><![CDATA[It's time for a bit of new thinking on how we cast blame for a specific disease on a specific microorganism. Here are some pointers for those studying towards the MSc in Microbiology &#038; Infectious Diseases. Internal &#038; external links are provided to supplement your own ideas.]]></description>
			<content:encoded><![CDATA[<iframe src="http://www.facebook.com/plugins/like.php?href=http%3A%2F%2Fmicrognome.priobe.net%2F2010%2F09%2Fwords-of-wisdom%2F&amp;layout=standard&amp;show_faces=true&amp;width=450&amp;action=like&amp;colorscheme=light&amp;height=80" scrolling="no" frameborder="0" style="border:none; overflow:hidden; width:450px; height:80px;" allowTransparency="true"></iframe><div><span style="font-size: medium;"> </span>It&#8217;s time for a bit of new thinking on how we cast blame for a specific disease on a specific microorganism. Here are some pointers for those studying towards the MSc in Microbiology &amp; Infectious Diseases. Internal &amp; external links are provided to supplement your own ideas.</div>
<div id="attachment_1841" class="wp-caption aligncenter" style="width: 160px"><a href="http://micrognome.priobe.net/wp-content/uploads/2010/09/Socrates2-e1285498438252.jpg"><img class="size-thumbnail wp-image-1841" title="Socrates" src="http://micrognome.priobe.net/wp-content/uploads/2010/09/Socrates2-150x150.jpg" alt="" width="150" height="150" /></a><p class="wp-caption-text">Socrates</p></div>
<p>Notes for last week&#8217;s four-lecture marathon can be found via the following links:</p>
<ul>
<li>
<div style="padding-left: 20px;"><span style="font-size: medium;"><strong>Epi 1</strong>:  travel-associated infection risks: </span><a href="http://micrognome.priobe.net/2010/06/tropical-medicine-masterclass/"><span style="font-size: medium;">Tropical medicine masterclass</span></a><span style="font-size: medium;">, </span><a href="http://wwwnc.cdc.gov/travel/content/yellowbook/home-2010.aspx"><span style="font-size: medium;">CDC Yellow book</span></a></div>
</li>
<li>
<div style="padding-left: 20px;"><span style="font-size: medium;"><strong>Epi 2</strong>: <a href="http://www.priobe.net/">Priobes &amp; </a></span><span style="font-size: medium;"><a href="http://www.priobe.net/">the principles of aetiology</a></span><span style="font-size: medium;">: <em><a href="http://jmm.sgmjournals.org/cgi/content/full/56/11/1419">Principia ætiologica</a></em> paper</span></div>
</li>
<li>
<div style="padding-left: 20px;"><span style="font-size: medium;"><strong>Diagnostics</strong>: </span><a href="http://micrognome.priobe.net/2010/01/%ce%bcgnostics-101/"><span style="font-size: medium;">identification &amp; characterisation</span></a><span style="font-size: medium;"> of biological agents of disease. </span><a href="http://micrognome.priobe.net/2010/01/sepsis-detectives/"><span style="font-size: medium;">Sepsis detectives</span></a><span style="font-size: medium;">, </span><a href="http://www.priobe.net/index.php?option=com_content&amp;view=article&amp;id=15:the-language-of-infection&amp;catid=25:language-of-infection&amp;Itemid=44"><span style="font-size: medium;">introduction to language of infection</span></a><span style="font-size: medium;">, </span><a href="http://www.priobe.net/index.php?option=com_content&amp;view=article&amp;id=16:substantivos-nouns&amp;catid=25:language-of-infection&amp;Itemid=44"><span style="font-size: medium;">substantives</span></a><span style="font-size: medium;">, </span><a href="http://www.priobe.net/index.php?option=com_content&amp;view=category&amp;layout=blog&amp;id=25&amp;Itemid=44"><span style="font-size: medium;">verbs</span></a></div>
</li>
<li>
<div style="padding-left: 20px;"><a href="http://www.priobe.net/index.php?option=com_content&amp;view=article&amp;id=22:burkholderia-pseudomallei&amp;catid=11:priobes&amp;Itemid=37"><strong><span style="font-size: medium;">Melioidosis</span></strong></a><span style="font-size: medium;"> resource centre</span></div>
</li>
</ul>
<p style="padding-left: 30px;">Additional support materials are available to members of the University of Western Australia through WebCT.</p>
]]></content:encoded>
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		</item>
		<item>
		<title>Sinister soils</title>
		<link>http://micrognome.priobe.net/2010/08/sinister-soils/</link>
		<comments>http://micrognome.priobe.net/2010/08/sinister-soils/#comments</comments>
		<pubDate>Sun, 08 Aug 2010 23:22:56 +0000</pubDate>
		<dc:creator>micrognome</dc:creator>
				<category><![CDATA[Featured]]></category>
		<category><![CDATA[μGnews]]></category>
		<category><![CDATA[μGnotes]]></category>
		<category><![CDATA[Burkholderia pseudomallei]]></category>
		<category><![CDATA[melioidosis]]></category>
		<category><![CDATA[soil]]></category>
		<category><![CDATA[soil-borne infections]]></category>
		<category><![CDATA[tropical infections]]></category>

		<guid isPermaLink="false">http://micrognome.priobe.net/?p=1515</guid>
		<description><![CDATA[Melioidosis is a potentially fatal tropical, soil-borne infection prevalent in Northern Australia, Southeast Asia and other parts of the intertropical zone. Though relatively uncommon in Australia, agriculture, mining and the effects of climate change are expected to affect the epidemiology of melioidosis. Improved methods for targeted environmental surveillance for Burkholderia pseudomallei, the bacterial cause of melioidosis, is urgently needed.]]></description>
			<content:encoded><![CDATA[<iframe src="http://www.facebook.com/plugins/like.php?href=http%3A%2F%2Fmicrognome.priobe.net%2F2010%2F08%2Fsinister-soils%2F&amp;layout=standard&amp;show_faces=true&amp;width=450&amp;action=like&amp;colorscheme=light&amp;height=80" scrolling="no" frameborder="0" style="border:none; overflow:hidden; width:450px; height:80px;" allowTransparency="true"></iframe><p>The MicroGnome was busy in Queensland last week, revisiting his roots in soil microbiology at the 19th World Congress of Soil Science. His lecture on environmental aspects of melioidosis can be found on the Priobe Net via <a href="https://docs.google.com/leaf?id=0B2mqN4OD4eoxMzhkMjVjOTQtZjNlYS00OGM2LTgzZjMtNjk0NTEwNDM2N2M5&amp;hl=en">this link</a>.</p>
<p>Other recent material on melioidosis and its corresponding priobe can be found either <a href="http://www.priobe.net/index.php?option=com_content&amp;view=article&amp;id=22:burkholderia-pseudomallei&amp;catid=11:priobes&amp;Itemid=37">here </a>on the <a href="http://www.priobe.net/"><em><strong>Priobe Net</strong></em> </a>or the <a href="http://micrognome.priobe.net/2010/06/clinical-challenges-in-tropical-medicine/">MicroGnome</a> site.</p>
<p>An <a href="http://lifeinthefastlane.com/2010/05/melioidosis-a-disease-of-surprises/">editorial on melioidosis </a>was posted recently by our colleagues at <a href="http://lifeinthefastlane.com/">Life in the Fastlane</a>.</p>
<p>Happy digging!</p>
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		</item>
		<item>
		<title>Dirt &amp; disease way up north</title>
		<link>http://micrognome.priobe.net/2010/05/dirt-disease-way-up-north/</link>
		<comments>http://micrognome.priobe.net/2010/05/dirt-disease-way-up-north/#comments</comments>
		<pubDate>Tue, 25 May 2010 08:59:48 +0000</pubDate>
		<dc:creator>micrognome</dc:creator>
				<category><![CDATA[μGnews]]></category>
		<category><![CDATA[μGnomics]]></category>
		<category><![CDATA[Burkholderia pseudomallei]]></category>
		<category><![CDATA[climate change]]></category>
		<category><![CDATA[melioidosis]]></category>
		<category><![CDATA[pneumonia]]></category>
		<category><![CDATA[septicaemia]]></category>
		<category><![CDATA[severe weather]]></category>

		<guid isPermaLink="false">http://micrognome.priobe.net/?p=1080</guid>
		<description><![CDATA[melioidosis in the news again]]></description>
			<content:encoded><![CDATA[<iframe src="http://www.facebook.com/plugins/like.php?href=http%3A%2F%2Fmicrognome.priobe.net%2F2010%2F05%2Fdirt-disease-way-up-north%2F&amp;layout=standard&amp;show_faces=true&amp;width=450&amp;action=like&amp;colorscheme=light&amp;height=80" scrolling="no" frameborder="0" style="border:none; overflow:hidden; width:450px; height:80px;" allowTransparency="true"></iframe><p>Once again <a href="http://www.priobe.net/index.php?option=com_content&amp;view=article&amp;id=22:burkholderia-pseudomallei&amp;catid=11:priobes&amp;Itemid=37">melioidosis </a>is in the news. Queensland Health&#8217;s Dr Jeff Hanna has highlighted the <a href="http://www.abc.net.au/news/stories/2010/05/17/2900951.htm">melioidosis hot spot </a>recently identified in the vicinity of Townsville, and Darwin melioidosis export Prof Bart Currie fronts up on the ABC&#8217;s <em><strong>7.30 Report</strong></em> tonight.</p>
<p>Changing climate conditions in the north, particularly in the northwest, are thought to be responsible for some of the apparent increase in cases that can be blamed on <a href="http://ije.oxfordjournals.org/cgi/content/full/35/2/323?view=long&amp;pmid=16326823">severe weather events</a>. But occupational activities as diverse as expansion of farming, the <a href="http://www.ajtmh.org/cgi/content/full/80/1/78">mining industry </a>and even the <a href="http://micrognome.priobe.net/2010/04/mud-and-blood/">local film industry </a>could all contribute to an increase in meaningful encounters with a contaminated environment, and therefore subsequent cases of infection.</p>
<p>For a recent on-line review on melioidosis, see <a href="http://lifeinthefastlane.com/2010/05/melioidosis-a-disease-of-surprises/">Life in the Fast Lane</a>.</p>
]]></content:encoded>
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		</item>
		<item>
		<title>Melioidosis treatment</title>
		<link>http://micrognome.priobe.net/2010/04/melioidosis-treatment/</link>
		<comments>http://micrognome.priobe.net/2010/04/melioidosis-treatment/#comments</comments>
		<pubDate>Wed, 28 Apr 2010 04:36:35 +0000</pubDate>
		<dc:creator>micrognome</dc:creator>
				<category><![CDATA[μGnews]]></category>
		<category><![CDATA[μGnotes]]></category>
		<category><![CDATA[Burkholderia pseudomallei]]></category>
		<category><![CDATA[eradication therapy]]></category>
		<category><![CDATA[meliodosis]]></category>
		<category><![CDATA[post-exposure prophylaxis]]></category>
		<category><![CDATA[septicaemia]]></category>

		<guid isPermaLink="false">http://micrognome.priobe.net/?p=837</guid>
		<description><![CDATA[An update on how to treat melioidosis has just been posted by one of the open-source, on-line journals. This article provides a handy summary of current treatment options in a Table, dividing treatment into three phases of infection: 0, 1 and 2.]]></description>
			<content:encoded><![CDATA[<iframe src="http://www.facebook.com/plugins/like.php?href=http%3A%2F%2Fmicrognome.priobe.net%2F2010%2F04%2Fmelioidosis-treatment%2F&amp;layout=standard&amp;show_faces=true&amp;width=450&amp;action=like&amp;colorscheme=light&amp;height=80" scrolling="no" frameborder="0" style="border:none; overflow:hidden; width:450px; height:80px;" allowTransparency="true"></iframe><p>An update on how to treat melioidosis has just been posted by one of the open-source, on-line journals. <a href="http://www.mdpi.com/1424-8247/3/5/1296/">This article</a> provides a handy summary of current treatment options in a Table, dividing treatment into three phases of infection: 0, 1 and 2.</p>
<blockquote><p>Melioidosis is a complex bacterial infection, treatment of which combines the urgency of treating rapidly fatal Gram negative septicaemia with the need for eradication of long-term persistent disease in pulmonary, soft tissue, skeletal and other organ systems. Incremental improvements in treatment have been made as a result of multicentre collaboration across the main endemic region of Southeast Asia and northern Australia.</p>
<p>There is an emerging consensus on the three main patterns of antimicrobial chemotherapy; initial (Phase 1) treatment, subsequent eradication (Phase 2) therapy and most recently post-exposure (Phase 0) prophylaxis. The combination of agents used, duration of therapy and need for adjunct modalities depends on the type, severity and antimicrobial susceptibility of infection. New antibiotic and adjunct therapies are at an investigational stage but on currently available data are unlikely to make a significant impact on this potentially fatal infection.</p></blockquote>
<p>This treatment guide has been added to our <a href="http://micrognome.priobe.net/faqs/">FAQ page</a>. The entire article can be obtained via the journal&#8217;s website.</p>
<p><a style="display:none;" id="ddetlink1725622175" href="javascript:expand(document.getElementById('ddet1725622175'))">More information on melioidosis</a>
<div class="ddet_div" id="ddet1725622175"><script language="JavaScript" type="text/javascript">expand(document.getElementById('ddet1725622175'));expand(document.getElementById('ddetlink1725622175'))</script></p>

<iframe src="http://docs.google.com/viewer?url=http%3A%2F%2Fmicrognome.priobe.net%2Fwp-content%2Fuploads%2F2010%2F05%2FMelioidosis-2010.pdf&hl=en_GB&embedded=true" class="gde-frame" style="width:95%; height:450px; border: none;"></iframe>

<p class="gde-text"><a href="http://micrognome.priobe.net/wp-content/uploads/2010/05/Melioidosis-2010.pdf" target="_blank" class="gde-link">Download (PDF, 849.68KB)</a></p>
<p></div></p>
<p><strong>Reference</strong>:</p>
<blockquote><p>Inglis, T.J. The Treatment of Melioidosis. <em>Pharmaceuticals</em> <strong>2010</strong>, <em>3</em>, 1296-1303 [<a href="http://www.mdpi.com/1424-8247/3/5/1296/">Reference</a>]</p></blockquote>
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		<title>Melioidosis challenge</title>
		<link>http://micrognome.priobe.net/2010/03/melioidosis-challenge/</link>
		<comments>http://micrognome.priobe.net/2010/03/melioidosis-challenge/#comments</comments>
		<pubDate>Sat, 20 Mar 2010 03:28:02 +0000</pubDate>
		<dc:creator>micrognome</dc:creator>
				<category><![CDATA[FACTM]]></category>
		<category><![CDATA[μGnomics]]></category>
		<category><![CDATA[Burkholderia pseudomallei]]></category>
		<category><![CDATA[melioidosis]]></category>

		<guid isPermaLink="false">http://micrognome.priobe.net/?p=316</guid>
		<description><![CDATA[Here are a few questions to tickle the grey cells while you kick back and prepare for another week battling germs. You might even want to use the comment option to fire back dot point, short notes style answers: Give a brief account of the Burkholderias Explain the differences in virulence among Burkholderia species Describe [...]]]></description>
			<content:encoded><![CDATA[<iframe src="http://www.facebook.com/plugins/like.php?href=http%3A%2F%2Fmicrognome.priobe.net%2F2010%2F03%2Fmelioidosis-challenge%2F&amp;layout=standard&amp;show_faces=true&amp;width=450&amp;action=like&amp;colorscheme=light&amp;height=80" scrolling="no" frameborder="0" style="border:none; overflow:hidden; width:450px; height:80px;" allowTransparency="true"></iframe><p>Here are a few questions to tickle the grey cells while you kick back and prepare for another week battling germs. You might even want to use the comment option to fire back dot point, short notes style answers:</p>
<p><strong> </strong></p>
<ol>
<li><span style="color: #800000;"><strong>Give a brief account of the Burkholderias</strong></span></li>
<li><span style="color: #000000; font-weight: normal;"><span style="color: #800000;"><strong>Explain the differences in virulence among </strong></span><em><span style="color: #800000;"><strong>Burkholderia</strong></span></em><span style="color: #800000;"><strong> species</strong></span></span></li>
<li><strong><span style="color: #800000;">Describe recent changes in the epidemiology of melioidosis</span></strong></li>
<li><strong><span style="color: #800000;">Why is melioidosis often considered a tropical disease?</span></strong></li>
</ol>
<p>Have a look around the site for clues before you finalise your answer.</p>
<p><a href="http://micrognome.priobe.net/wp-content/uploads/2010/03/red-hat.jpg"><img class="alignleft size-full wp-image-293" title="red hat" src="http://micrognome.priobe.net/wp-content/uploads/2010/03/red-hat.jpg" alt="" width="51" height="45" /></a>μgnome, 20th March</p>
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